Package: telemetR 1.0
telemetR: Filter and Analyze Generalised Telemetry Data from Organisms
Analyze telemetry datasets generalized to allow any technology. The filtering steps check for false positives caused by reflected transmissions from surfaces and false pings from other noise generating equipment. The filters are based on JSATS filtering algorithms found in package 'filteRjsats' <https://CRAN.R-project.org/package=filteRjsats> but have been generalized to allow the user to define many of the filtering variables. Additionally, this package contains scripts used to help identify an optimal maximum blanking period as defined in Capello et al (2015) <doi:10.1371/journal.pone.0134002>. The functions were written according to their manuscript description, but have not been reviewed by the authors for accuracy. It is included here as is, without warranty.
Authors:
telemetR_1.0.tar.gz
telemetR_1.0.zip(r-4.5)telemetR_1.0.zip(r-4.4)telemetR_1.0.zip(r-4.3)
telemetR_1.0.tgz(r-4.4-any)telemetR_1.0.tgz(r-4.3-any)
telemetR_1.0.tar.gz(r-4.5-noble)telemetR_1.0.tar.gz(r-4.4-noble)
telemetR_1.0.tgz(r-4.4-emscripten)telemetR_1.0.tgz(r-4.3-emscripten)
telemetR.pdf |telemetR.html✨
telemetR/json (API)
| # Install 'telemetR' in R: |
| install.packages('telemetR', repos = c('https://tspaulding-esa.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/tspaulding-esa/telemetr/issues
- blanked_detects - Example Multi-blanked Detection Data
- conv_thresh - Example 95 Percent Convergence Threshold
- dat_filt1 - Prefiltered detection data
- dat_orgfilt - Filtered detection data with Organism Data
- ex_opt - Example Optimum Maximum Blanking Period
- ex_rSSR - Example Renormalized Sum of Squares
- filtered_detections - Example Completely Filtered Detection Data
- fish - Fish Data
- raw_detections - Unfiltered detection data
- receivers - Receiver Data
- reftags - Example reference tags
- time_test - Example Time Tests for Multi-blanked Detection Data
Last updated 10 months agofrom:c27a4d0c5d. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 03 2024 |
| R-4.5-win | OK | Nov 03 2024 |
| R-4.5-linux | OK | Nov 03 2024 |
| R-4.4-win | OK | Nov 03 2024 |
| R-4.4-mac | OK | Nov 03 2024 |
| R-4.3-win | OK | Nov 03 2024 |
| R-4.3-mac | OK | Nov 03 2024 |
Exports:add_orgblanking_eventbuild_residenceconv_thresholdsduration_comparefilter_2hfilter_4hformat_detectsformat_orgformat_receiversopt_mbpprefilterrenorm_SSRresidence_plotrSSR_plotsetup_blanking
Dependencies:clicolorspacecpp11dplyrfansifarvergenericsggplot2gluegtableisobandlabelinglatticelifecyclelubridatemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigpurrrR6RColorBrewerrlangscalesstringistringrtibbletidyrtidyselecttimechangeutf8vctrsviridisLitewithrzoo
